Dataset
| Title | A three-dimensional, population-based average of the C57BL/6 mouse brain from DAPI-stained coronal slices |
| Authors | Stæger Frederik Filip, Mortensen Kristian, Kaufmann Louis, Hirase Hajime, Sigurdsson Björn, Nedergaard Maiken, |
| Description | The full data set and pipeline for constructing the three-dimensional, population-based average of the C57BL/6 mouse brain form DAPI-stained coronal slices. This repository also contains a python implementation of automatic coronal brain slice segmentation. The data set constitutes of all the raw slice images (.tif) in full resolution, the pre-processed version (.nii), the individually reconstructed brain volumes, and the final population-based average. |
| License | Creative Commons CC0 1.0 Public Domain Dedication (https://creativecommons.org/publicdomain/zero/1.0/) |
| References |
A three-dimensional, population-based average of the C57BL/6 mouse brain from DAPI-stained coronal slices
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| Funding | |
| Keywords |
Neuroscience
Mouse brain template C57BL/6 brain template DAPI Population-based average Automatic segementation |
| Data | This dataset can be browsed online here or downloaded as a zip archive (105 GiB). The current version of the dataset repository, possibly with updates, can be found here. |
| DOI | 10.12751/g-node.1545d5 |
| Citation |
This dataset can be cited as: Stæger F, Mortensen K, Kaufmann L, Hirase H, Nedergaard M, (2019) A three-dimensional, population-based average of the C57BL/6 mouse brain from DAPI-stained coronal slices. G-Node. doi:10.12751/g-node.1545d5 Please also consider citing the material listed in the references |
| Resource Type |
Dataset |
